Manta

Rapid structural variant caller tailored specifically for high-throughput clinical sequencing pipelines.

What it does

Exceptional at discovering break-end structural variants and medium-sized indels that read-depth alone cannot accurately resolve.

How to use

See https://github.com/Illumina/manta for documentation and access.

STRC usage

Not directly applicable to E1659A via API. Requires local installation or web interface. See documentation for manual usage.

Connections

• STRC Variant c.4976A>C — Misha [see-also]
• STRC Gene [about]
• [part-of] Tools index